EnhancerDB
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  3. rs576574341[chr1:27879863]
Enhancers that have rs576574341[chr1:27879863]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs576574341[chr1:27879863]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27879856 27879870 GATA2 JASPAR yes 27708019
chr1 27879856 27879870 TCF7L2 JASPAR yes 27708020
chr1 27879856 27879871 LEF1 JASPAR yes 27708021
chr1 27879858 27879866 GATA3 JASPAR yes 27708022
Genes associated with rs576574341[chr1:27879863], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More