EnhancerDB
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  3. rs576926406[chr1:178026358]
Enhancers that have rs576926406[chr1:178026358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178015665 178033840 enh12406
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Lung (PC-9) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs576926406[chr1:178026358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178025883 178026389 TCF7L2 GTRD no Colon (HCT116) 21352421
chr1 178026348 178026358 HOXA13 JASPAR yes 33390452
chr1 178026348 178026358 HOXB13 JASPAR yes 33390453
chr1 178026348 178026358 HOXD13 JASPAR yes 33390454
chr1 178026348 178026359 HOXA10 JASPAR yes 33390455
chr1 178026349 178026358 CDX1 JASPAR yes 33390456
chr1 178026349 178026359 MNX1 JASPAR yes 33390457
chr1 178026349 178026360 CDX2 JASPAR yes 33390458
Genes associated with rs576926406[chr1:178026358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More