EnhancerDB
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  3. rs576927133[chr1:231522299]
Enhancers that have rs576927133[chr1:231522299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs576927133[chr1:231522299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231522293 231522308 HNF1A JASPAR yes 36087529
chr1 231522295 231522302 NKX3-1 JASPAR yes 36087530
chr1 231522295 231522306 PHOX2A JASPAR yes 36087531
chr1 231522295 231522306 PROP1 JASPAR yes 36087532
chr1 231522295 231522311 POU4F2 JASPAR yes 36087533
chr1 231522295 231522311 POU4F3 JASPAR yes 36087534
chr1 231522297 231522311 POU4F1 JASPAR yes 36087535
chr1 231522297 231522312 HNF1A JASPAR yes 36087536
chr1 231522298 231522308 HOXB2 JASPAR yes 36087537
chr1 231522298 231522308 HOXB3 JASPAR yes 36087538
chr1 231522298 231522308 MNX1 JASPAR yes 36087539
chr1 231522298 231522308 POU6F1 JASPAR yes 36087540
chr1 231522298 231522311 HNF1B JASPAR yes 36087541
chr1 231522298 231522312 POU4F1 JASPAR yes 36087542
chr1 231522298 231522314 POU4F3 JASPAR yes 36087543
chr1 231522299 231522307 LMX1A JASPAR yes 36087544
chr1 231522299 231522307 LMX1B JASPAR yes 36087545
chr1 231522299 231522307 NKX6-1 JASPAR yes 36087546
chr1 231522299 231522307 NKX6-2 JASPAR yes 36087547
chr1 231522299 231522307 VAX1 JASPAR yes 36087548
chr1 231522299 231522307 VAX2 JASPAR yes 36087549
chr1 231522299 231522307 VSX1 JASPAR yes 36087550
chr1 231522299 231522307 VSX2 JASPAR yes 36087551
chr1 231522299 231522315 POU4F2 JASPAR yes 36087552
chr1 231522299 231522315 POU4F3 JASPAR yes 36087553
Genes associated with rs576927133[chr1:231522299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More