EnhancerDB
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  3. rs577065980[chr12:108690600]
Enhancers that have rs577065980[chr12:108690600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108689886 108710415 enh14968
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs577065980[chr12:108690600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 108690598 108690613 FOXP1 JASPAR yes 123589531
chr12 108690598 108690619 IRF1 JASPAR yes 123589532
chr12 108690599 108690614 FOXP1 JASPAR yes 123589533
chr12 108690600 108690621 IRF1 JASPAR yes 123589534
Genes associated with rs577065980[chr12:108690600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More