EnhancerDB
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  3. rs577069475[chr17:40407881]
Enhancers that have rs577069475[chr17:40407881]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs577069475[chr17:40407881]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40407868 40407882 PLAG1 JASPAR yes 54290409
chr17 40407869 40407881 TFAP2A JASPAR yes 54290410
chr17 40407875 40407881 SP1 TRANSFAC yes 54290411
chr17 40407876 40407881 SP1 TRANSFAC yes 54290412
chr17 40407879 40407896 RARA JASPAR yes 54290413
Genes associated with rs577069475[chr17:40407881], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More