EnhancerDB
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  3. rs577133376[chr17:39811920]
Enhancers that have rs577133376[chr17:39811920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr17 39811785 39812247 vista24793
VISTA
Transcript factors that have rs577133376[chr17:39811920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39811353 39812759 ZNF274 GTRD no Blood (GM12878) 108259221
chr17 39811792 39812302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758063
chr17 39811792 39812302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259222
chr17 39811801 39812161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758064
chr17 39811801 39812161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259223
chr17 39811843 39812239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758065
chr17 39811843 39812239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259224
chr17 39811851 39812315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758066
chr17 39811851 39812315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259225
chr17 39811851 39812501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758067
chr17 39811851 39812501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259226
chr17 39811852 39812402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758068
chr17 39811852 39812402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259227
chr17 39811888 39812198 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21758069
chr17 39811888 39812198 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108259228
chr17 39811899 39812375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758070
chr17 39811899 39812375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259229
chr17 39811917 39811928 FOXA1 JASPAR yes 21238906
chr17 39811917 39811928 FOXA1 JASPAR yes 54269114
Genes associated with rs577133376[chr17:39811920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More