EnhancerDB
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  3. rs577246409[chr6:36587228]
Enhancers that have rs577246409[chr6:36587228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36569515 36588579 enh23193
Liver Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs577246409[chr6:36587228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36587221 36587242 IRF1 JASPAR yes 101350122
chr6 36587223 36587244 IRF1 JASPAR yes 101350123
chr6 36587226 36587230 YY1 TRANSFAC yes 101350124
chr6 36587226 36587241 FOXP1 JASPAR yes 101350125
chr6 36587227 36587242 FOXP1 JASPAR yes 101350126
chr6 36587228 36587243 FOXP1 JASPAR yes 101350127
Genes associated with rs577246409[chr6:36587228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More