EnhancerDB
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  3. rs577247596[chr12:125384230]
Enhancers that have rs577247596[chr12:125384230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs577247596[chr12:125384230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125384209 125384230 IRF1 JASPAR yes 124431046
chr12 125384210 125384231 IRF1 JASPAR yes 124431047
chr12 125384211 125384232 IRF1 JASPAR yes 124431049
chr12 125384215 125384236 IRF1 JASPAR yes 124431050
chr12 125384216 125384231 FOXP1 JASPAR yes 124431051
chr12 125384216 125384237 IRF1 JASPAR yes 124431052
chr12 125384217 125384238 IRF1 JASPAR yes 124431053
chr12 125384218 125384233 FOXP1 JASPAR yes 124431054
chr12 125384218 125384239 IRF1 JASPAR yes 124431055
chr12 125384219 125384240 IRF1 JASPAR yes 124431056
chr12 125384220 125384235 FOXP1 JASPAR yes 124431057
chr12 125384220 125384241 IRF1 JASPAR yes 124431058
chr12 125384221 125384236 FOXP1 JASPAR yes 124431059
chr12 125384222 125384237 FOXP1 JASPAR yes 124431060
chr12 125384223 125384238 FOXP1 JASPAR yes 124431061
chr12 125384224 125384239 FOXP1 JASPAR yes 124431062
chr12 125384225 125384240 FOXP1 JASPAR yes 124431063
chr12 125384226 125384241 FOXP1 JASPAR yes 124431064
chr12 125384230 125384244 IRF7 JASPAR yes 124431065
Genes associated with rs577247596[chr12:125384230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More