EnhancerDB
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  3. rs577249516[chr1:52105678]
Enhancers that have rs577249516[chr1:52105678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577249516[chr1:52105678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52105657 52105678 IRF1 JASPAR yes 28857927
chr1 52105663 52105678 FOXP1 JASPAR yes 28857930
chr1 52105672 52105686 IRF7 JASPAR yes 28857933
chr1 52105672 52105687 MEF2A JASPAR yes 28857934
chr1 52105673 52105688 MEF2C JASPAR yes 28857935
chr1 52105674 52105686 MEF2A JASPAR yes 28857936
chr1 52105674 52105686 MEF2B JASPAR yes 28857937
chr1 52105674 52105686 MEF2D JASPAR yes 28857938
chr1 52105675 52105685 MEF2A JASPAR yes 28857939
Genes associated with rs577249516[chr1:52105678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More