EnhancerDB
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  3. rs577385875[chr2:27960842]
Enhancers that have rs577385875[chr2:27960842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr2 27960575 27961156 vista30789
VISTA
Transcript factors that have rs577385875[chr2:27960842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27960835 27960850 HNF4A JASPAR yes 22022626
chr2 27960835 27960850 HNF4A JASPAR yes 72587480
chr2 27960836 27960850 RXRG JASPAR yes 22022627
chr2 27960836 27960850 RXRG JASPAR yes 72587481
chr2 27960836 27960851 HNF4G JASPAR yes 22022628
chr2 27960836 27960851 NR2C2 JASPAR yes 22022629
chr2 27960836 27960851 HNF4G JASPAR yes 72587482
chr2 27960836 27960851 NR2C2 JASPAR yes 72587483
chr2 27960840 27960846 SOX10 JASPAR yes 22022630
chr2 27960840 27960846 SOX10 JASPAR yes 72587484
Genes associated with rs577385875[chr2:27960842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More