EnhancerDB
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  3. rs577409565[chr12:50927139]
Enhancers that have rs577409565[chr12:50927139]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577409565[chr12:50927139]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 21545031
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031199
chr12 50923339 50928617 ZNF274 GTRD no Bone Marrow (K562) 108031200
chr12 50926446 50927478 ZNF274 GTRD no Liver (HepG2) 21545168
chr12 50926446 50927478 ZNF274 GTRD no Liver (HepG2) 108031349
chr12 50926543 50927305 ZNF274 GTRD no Bone Marrow (K562) 21545183
chr12 50926543 50927305 ZNF274 GTRD no Bone Marrow (K562) 108031364
chr12 50926574 50927272 ZNF274 GTRD no Liver (HepG2) 21545185
chr12 50926574 50927272 ZNF274 GTRD no Liver (HepG2) 108031366
chr12 50926670 50928957 ZNF274 GTRD no Liver (HepG2) 21545200
chr12 50926670 50928957 ZNF274 GTRD no Liver (HepG2) 108031381
chr12 50926785 50927455 ZNF274 GTRD no Liver (HepG2) 21545214
chr12 50926785 50927455 ZNF274 GTRD no Liver (HepG2) 108031397
chr12 50926807 50927374 ZNF274 GTRD no Liver (HepG2) 21545217
chr12 50926807 50927374 ZNF274 GTRD no Liver (HepG2) 108031400
chr12 50926846 50927451 ZNF274 GTRD no Liver (HepG2) 21545218
chr12 50926846 50927451 ZNF274 GTRD no Liver (HepG2) 108031401
chr12 50926877 50927200 ZNF274 GTRD no Liver (HepG2) 21545219
chr12 50926877 50927200 ZNF274 GTRD no Liver (HepG2) 108031402
chr12 50926886 50927383 ZNF274 GTRD no Liver (HepG2) 21545220
chr12 50926886 50927383 ZNF274 GTRD no Liver (HepG2) 108031403
chr12 50926903 50927333 ZNF274 GTRD no Liver (HepG2) 21545221
chr12 50926903 50927333 ZNF274 GTRD no Liver (HepG2) 108031404
chr12 50926906 50927332 ZNF274 GTRD no Bone Marrow (K562) 21545222
chr12 50926906 50927332 ZNF274 GTRD no Bone Marrow (K562) 108031405
chr12 50926918 50927215 ZNF274 GTRD no Liver (HepG2) 21545223
chr12 50926918 50927215 ZNF274 GTRD no Liver (HepG2) 108031406
chr12 50926918 50927241 ZNF274 GTRD no Liver (HepG2) 21545224
chr12 50926918 50927241 ZNF274 GTRD no Liver (HepG2) 108031407
chr12 50926922 50927571 ZNF274 GTRD no Liver (HepG2) 21545225
chr12 50926922 50927571 ZNF274 GTRD no Liver (HepG2) 108031408
chr12 50926927 50927288 ZNF274 GTRD no Liver (HepG2) 21545226
chr12 50926927 50927288 ZNF274 GTRD no Liver (HepG2) 108031409
chr12 50926933 50927361 ZNF274 GTRD no Liver (HepG2) 21545227
chr12 50926933 50927361 ZNF274 GTRD no Liver (HepG2) 108031410
chr12 50926941 50927425 ZNF274 GTRD no Bone Marrow (K562) 21545228
chr12 50926941 50927425 ZNF274 GTRD no Bone Marrow (K562) 108031411
chr12 50926948 50927303 ZNF274 GTRD no Liver (HepG2) 21545229
chr12 50926948 50927303 ZNF274 GTRD no Liver (HepG2) 108031412
chr12 50926950 50927394 ZNF274 GTRD no Liver (HepG2) 21545230
chr12 50926950 50927394 ZNF274 GTRD no Liver (HepG2) 108031413
chr12 50926966 50927421 ZNF274 GTRD no Liver (HepG2) 21545231
chr12 50926966 50927421 ZNF274 GTRD no Liver (HepG2) 108031414
chr12 50926967 50927446 ZNF274 GTRD no Liver (HepG2) 21545232
chr12 50926967 50927446 ZNF274 GTRD no Liver (HepG2) 108031415
chr12 50926968 50927582 ZNF274 GTRD no Bone Marrow (K562) 21545233
chr12 50926968 50927582 ZNF274 GTRD no Bone Marrow (K562) 108031416
chr12 50927127 50927139 PBX1 JASPAR yes 120839668
chr12 50927129 50927150 IRF1 JASPAR yes 120839669
chr12 50927130 50927145 FOXP1 JASPAR yes 120839670
chr12 50927131 50927140 SRY JASPAR yes 120839671
Genes associated with rs577409565[chr12:50927139], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More