EnhancerDB
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  3. rs57744001[chr6:35569896]
Enhancers that have rs57744001[chr6:35569896]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35560685 35576643 enh9078
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 35569141 35569999 vista51718
VISTA
Transcript factors that have rs57744001[chr6:35569896]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35569512 35570008 TCF7L2 UCSC Txn Factor no Conserved 108539861
chr6 35569674 35570012 NR3C1 UCSC Txn Factor no Conserved 108539862
chr6 35569890 35569905 AR JASPAR yes 70353093
chr6 35569890 35569905 AR JASPAR yes 101294121
chr6 35569896 35569907 NRL JASPAR yes 70353094
chr6 35569896 35569907 NRL JASPAR yes 101294122
Genes associated with rs57744001[chr6:35569896], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More