EnhancerDB
  1. Home
  2. SNP
  3. rs577479670[chr16:89554207]
Enhancers that have rs577479670[chr16:89554207]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs577479670[chr16:89554207]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89554190 89554211 IRF1 JASPAR yes 12350305
chr16 89554206 89554210 LFA1 TRANSFAC yes 12350306
Genes associated with rs577479670[chr16:89554207], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More