EnhancerDB
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  3. rs577507178[chr1:27898035]
Enhancers that have rs577507178[chr1:27898035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27897947 27898332 vista928
VISTA
Transcript factors that have rs577507178[chr1:27898035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27897976 27898226 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802594
chr1 27898026 27898036 SP1 JASPAR yes 27710594
chr1 27898026 27898036 SP1 JASPAR yes 118258579
chr1 27898027 27898037 SP1 JASPAR yes 27710595
chr1 27898027 27898037 SP1 JASPAR yes 118258580
chr1 27898028 27898043 TFAP2C JASPAR yes 27710596
chr1 27898028 27898043 TFAP2C JASPAR yes 118258581
chr1 27898030 27898042 TFAP2A JASPAR yes 27710597
chr1 27898030 27898042 TFAP2B JASPAR yes 27710598
chr1 27898030 27898042 TFAP2C JASPAR yes 27710599
chr1 27898030 27898042 TFAP2A JASPAR yes 118258582
chr1 27898030 27898042 TFAP2B JASPAR yes 118258583
chr1 27898030 27898042 TFAP2C JASPAR yes 118258584
chr1 27898030 27898045 TFAP2A JASPAR yes 27710600
chr1 27898030 27898045 TFAP2A JASPAR yes 118258585
chr1 27898031 27898042 TFAP2A JASPAR yes 27710601
chr1 27898031 27898042 TFAP2B JASPAR yes 27710602
chr1 27898031 27898042 TFAP2C JASPAR yes 27710603
chr1 27898031 27898042 TFAP2A JASPAR yes 118258586
chr1 27898031 27898042 TFAP2B JASPAR yes 118258587
chr1 27898031 27898042 TFAP2C JASPAR yes 118258588
chr1 27898032 27898041 TFAP2A JASPAR yes 27710604
chr1 27898032 27898041 TFAP2A JASPAR yes 118258589
Genes associated with rs577507178[chr1:27898035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More