EnhancerDB
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  3. rs577539277[chr1:205255620]
Enhancers that have rs577539277[chr1:205255620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205243649 205259635 enh893
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Heart
Transcript factors that have rs577539277[chr1:205255620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205255193 205256997 ZNF274 GTRD no Bone Marrow (K562) 21371396
chr1 205255358 205256831 ZNF274 GTRD no Bone Marrow (K562) 21371397
chr1 205255362 205256980 ZNF274 GTRD no Bone Marrow (K562) 21371398
chr1 205255418 205257168 ZNF143 GTRD no Epithelial (MCF-7) 21371399
chr1 205255441 205256860 ZNF274 GTRD no Bone Marrow (K562) 21371400
chr1 205255460 205256572 ZNF274 GTRD no Bone Marrow (K562) 21371401
chr1 205255494 205256716 ZNF274 GTRD no Bone Marrow (K562) 21371402
chr1 205255500 205256942 ZNF274 GTRD no Bone Marrow (K562) 21371403
chr1 205255517 205255807 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21371404
chr1 205255517 205256757 ZNF274 GTRD no Bone Marrow (K562) 21371405
chr1 205255561 205256352 ZNF274 GTRD no Bone Marrow (K562) 21371406
chr1 205255565 205256195 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371407
chr1 205255568 205256750 ZNF274 GTRD no Bone Marrow (K562) 21371408
chr1 205255570 205256450 ZNF274 GTRD no Bone Marrow (K562) 21371409
chr1 205255576 205256172 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371410
chr1 205255602 205256658 ZNF274 GTRD no Bone Marrow (K562) 21371411
chr1 205255608 205256044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21371412
chr1 205255613 205256778 ZNF274 GTRD no Bone Marrow (K562) 21371413
chr1 205255614 205255624 PAX3 JASPAR yes 34751615
chr1 205255614 205255624 PAX7 JASPAR yes 34751616
chr1 205255614 205255625 PHOX2A JASPAR yes 34751617
chr1 205255614 205255625 PROP1 JASPAR yes 34751618
Genes associated with rs577539277[chr1:205255620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More