EnhancerDB
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  3. rs577539693[chr16:69438279]
Enhancers that have rs577539693[chr16:69438279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 69423651 69440851 enh16750
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577539693[chr16:69438279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 69438272 69438282 EMX1 JASPAR yes 11264766
chr16 69438272 69438282 GBX2 JASPAR yes 11264767
chr16 69438272 69438282 GSX1 JASPAR yes 11264768
chr16 69438272 69438282 GSX2 JASPAR yes 11264769
chr16 69438272 69438282 HOXB2 JASPAR yes 11264770
chr16 69438272 69438282 HOXB3 JASPAR yes 11264771
chr16 69438272 69438282 MEOX1 JASPAR yes 11264772
chr16 69438272 69438282 MEOX2 JASPAR yes 11264773
chr16 69438272 69438282 MIXL1 JASPAR yes 11264774
chr16 69438272 69438282 MNX1 JASPAR yes 11264775
chr16 69438272 69438283 HOXA10 JASPAR yes 11264776
chr16 69438273 69438281 LMX1A JASPAR yes 11264777
chr16 69438273 69438281 LMX1B JASPAR yes 11264778
chr16 69438273 69438281 NKX6-1 JASPAR yes 11264779
chr16 69438273 69438281 NKX6-2 JASPAR yes 11264780
chr16 69438273 69438281 PDX1 JASPAR yes 11264781
chr16 69438273 69438281 VAX1 JASPAR yes 11264782
chr16 69438273 69438281 VAX2 JASPAR yes 11264783
chr16 69438273 69438281 VSX1 JASPAR yes 11264784
chr16 69438273 69438283 HOXD13 JASPAR yes 11264785
Genes associated with rs577539693[chr16:69438279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More