EnhancerDB
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  3. rs577541164[chr17:55455112]
Enhancers that have rs577541164[chr17:55455112]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55440094 55459475 enh17241
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577541164[chr17:55455112]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55448417 55457368 ZBTB33 GTRD no Lung (A549) 108273940
chr17 55448498 55457254 ZBTB33 GTRD no Lung (A549) 108273941
chr17 55454241 55457413 TEF1 GTRD no Bone (Osteoblast) 108273942
chr17 55454357 55457240 ZBTB33 GTRD no Lung (A549) 108273943
chr17 55455098 55455118 TP63 JASPAR yes 54948523
chr17 55455107 55455119 GRHL1 JASPAR yes 54948525
chr17 55455112 55455116 NFE TRANSFAC yes 54948526
chr17 55455112 55455125 SMAD2 JASPAR yes 54948527
chr17 55455112 55455133 ZNF263 JASPAR yes 54948528
Genes associated with rs577541164[chr17:55455112], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More