EnhancerDB
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  3. rs5776236[chr1:95276453]
Enhancers that have rs5776236[chr1:95276453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95276451 95276463 vista2578
VISTA
Transcript factors that have rs5776236[chr1:95276453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95276450 95276465 FOXP1 JASPAR yes 30919757
chr1 95276450 95276465 FOXP1 JASPAR yes 118334253
chr1 95276451 95276466 FOXP1 JASPAR yes 30919758
chr1 95276451 95276466 FOXP1 JASPAR yes 118334254
chr1 95276452 95276467 FOXP1 JASPAR yes 30919759
chr1 95276452 95276467 FOXP1 JASPAR yes 118334255
chr1 95276453 95276468 FOXP1 JASPAR yes 30919760
chr1 95276453 95276468 FOXP1 JASPAR yes 118334256
chr1 95276453 95276474 IRF1 JASPAR yes 30919761
chr1 95276453 95276474 IRF1 JASPAR yes 118334257
Genes associated with rs5776236[chr1:95276453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More