EnhancerDB
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  3. rs577711310[chr1:27854305]
Enhancers that have rs577711310[chr1:27854305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577711310[chr1:27854305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27854053 27854653 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802585
chr1 27854287 27854306 RFX2 JASPAR yes 27705424
chr1 27854292 27854311 RFX2 JASPAR yes 27705426
chr1 27854302 27854314 NHLH1 JASPAR yes 27705428
chr1 27854303 27854313 ID4 JASPAR yes 27705429
chr1 27854303 27854313 NHLH1 JASPAR yes 27705430
chr1 27854303 27854313 TCF3 JASPAR yes 27705431
chr1 27854303 27854313 TCF4 JASPAR yes 27705432
chr1 27854304 27854313 SNAI2 JASPAR yes 27705433
chr1 27854305 27854310 USF2 TRANSFAC yes 27705434
Genes associated with rs577711310[chr1:27854305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More