EnhancerDB
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  3. rs577719[chr1:55042165]
Enhancers that have rs577719[chr1:55042165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs577719[chr1:55042165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55042159 55042174 MEF2C JASPAR yes 28994620
chr1 55042159 55042180 IRF1 JASPAR yes 28994621
chr1 55042160 55042175 MEF2A JASPAR yes 28994622
chr1 55042162 55042177 FOXP1 JASPAR yes 28994623
chr1 55042163 55042169 TBP TRANSFAC yes 28994624
chr1 55042163 55042178 FOXP1 JASPAR yes 28994625
chr1 55042163 55042184 IRF1 JASPAR yes 28994626
chr1 55042164 55042179 FOXP1 JASPAR yes 28994627
chr1 55042164 55042185 IRF1 JASPAR yes 28994628
chr1 55042165 55042180 FOXP1 JASPAR yes 28994629
chr1 55042165 55042186 IRF1 JASPAR yes 28994630
Genes associated with rs577719[chr1:55042165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More