EnhancerDB
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  3. rs577792606[chr6:11278790]
Enhancers that have rs577792606[chr6:11278790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11250905 11281835 enh23019
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs577792606[chr6:11278790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538354
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538355
chr6 11277455 11278914 POLR2A UCSC Txn Factor no Conserved 108538356
chr6 11278540 11278833 RUNX3 UCSC Txn Factor no Conserved 108538362
chr6 11278787 11278802 MEF2C JASPAR yes 99872042
chr6 11278788 11278803 MEF2A JASPAR yes 99872043
Genes associated with rs577792606[chr6:11278790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More