EnhancerDB
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  3. rs5777929[chr1:154714186]
Enhancers that have rs5777929[chr1:154714186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154711786 154726515 enh27142
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs5777929[chr1:154714186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154714179 154714194 FOXP1 JASPAR yes 32306088
chr1 154714184 154714199 FOXP1 JASPAR yes 32306089
chr1 154714185 154714191 TBP TRANSFAC yes 32306090
chr1 154714185 154714200 FOXP1 JASPAR yes 32306091
chr1 154714186 154714201 FOXP1 JASPAR yes 32306092
chr1 154714186 154714207 IRF1 JASPAR yes 32306093
Genes associated with rs5777929[chr1:154714186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More