EnhancerDB
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  3. rs5777942[chr1:155194140]
Enhancers that have rs5777942[chr1:155194140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155186185 155200282 enh647
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs5777942[chr1:155194140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155191923 155197612 ZNF274 GTRD no Cervix (HeLa-S3) 21341379
chr1 155191925 155196309 ZNF274 GTRD no Cervix (HeLa-S3) 21341380
chr1 155192250 155196614 ZNF274 GTRD no Cervix (HeLa-S3) 21341381
chr1 155192353 155195582 ZNF143 GTRD no Epithelial (MCF-7) 21341382
chr1 155192365 155195220 ZNF143 GTRD no Epithelial (MCF-7) 21341383
chr1 155192377 155195191 ZNF143 GTRD no Epithelial (MCF-7) 21341384
chr1 155192407 155197777 ZNF274 GTRD no Cervix (HeLa-S3) 21341385
chr1 155192480 155195491 TCF7L2 GTRD no Colon (HCT116) 21341388
chr1 155192508 155195258 ZNF143 GTRD no Epithelial (MCF-7) 21341389
chr1 155192515 155195947 ZNF274 GTRD no Cervix (HeLa-S3) 21341390
chr1 155192528 155195611 TCF7L2 GTRD no Colon (HCT116) 21341391
chr1 155192531 155194350 ZNF143 GTRD no Epithelial (MCF-7) 21341392
chr1 155192537 155194783 ZNF143 GTRD no Epithelial (MCF-7) 21341393
chr1 155192571 155195551 ZNF143 GTRD no Epithelial (MCF-7) 21341394
chr1 155192600 155195736 TCF7L2 GTRD no Colon (HCT116) 21341395
chr1 155192637 155194190 TCF7L2 GTRD no Colon (HCT116) 21341397
chr1 155192651 155195609 TCF7L2 GTRD no Colon (HCT116) 21341398
chr1 155192662 155194171 ZNF143 GTRD no Epithelial (MCF-7) 21341399
chr1 155192697 155194262 ZNF143 GTRD no Epithelial (MCF-7) 21341401
chr1 155192703 155196178 ZNF143 GTRD no Epithelial (MCF-7) 21341402
chr1 155192718 155195601 ZNF143 GTRD no Epithelial (MCF-7) 21341403
chr1 155192718 155195739 ZNF143 GTRD no Epithelial (MCF-7) 21341404
chr1 155192780 155194395 ZNF143 GTRD no Epithelial (MCF-7) 21341406
chr1 155192815 155195265 ZNF143 GTRD no Epithelial (MCF-7) 21341408
chr1 155192944 155195474 ZNF143 GTRD no Epithelial (MCF-7) 21341411
chr1 155192956 155194203 ZNF143 GTRD no Epithelial (MCF-7) 21341413
chr1 155192960 155195257 ZNF274 GTRD no Cervix (HeLa-S3) 21341414
chr1 155192963 155195685 ZBTB33 GTRD no Brain (SK-N-SH) 21341415
chr1 155192966 155195204 ZNF143 GTRD no Epithelial (MCF-7) 21341416
chr1 155192968 155194163 ZNF143 GTRD no Epithelial (MCF-7) 21341417
chr1 155192972 155195134 ZNF143 GTRD no Epithelial (MCF-7) 21341418
chr1 155192973 155195253 ZNF274 GTRD no Cervix (HeLa-S3) 21341419
chr1 155192977 155194210 ZNF274 GTRD no Cervix (HeLa-S3) 21341420
chr1 155192982 155195542 ZNF274 GTRD no Cervix (HeLa-S3) 21341421
chr1 155192995 155194195 ZNF143 GTRD no Epithelial (MCF-7) 21341422
chr1 155193010 155194663 TCF7L2 GTRD no Colon (HCT116) 21341423
chr1 155193044 155194181 TCF7L2 GTRD no Colon (HCT116) 21341424
chr1 155193047 155195186 ZNF143 GTRD no Epithelial (MCF-7) 21341425
chr1 155193057 155194467 AR GTRD no Prostate (PC-3) 21341427
chr1 155193139 155194244 ZNF274 GTRD no Cervix (HeLa-S3) 21341431
chr1 155193168 155194190 ZNF274 GTRD no Cervix (HeLa-S3) 21341434
chr1 155193190 155194245 ZNF143 GTRD no Epithelial (MCF-7) 21341436
chr1 155193201 155195628 TCF7L2 GTRD no Colon (HCT116) 21341438
chr1 155193205 155194199 ZNF274 GTRD no Cervix (HeLa-S3) 21341439
chr1 155193247 155194356 ZNF143 GTRD no Epithelial (MCF-7) 21341443
chr1 155193288 155194257 ZBTB33 GTRD no Brain (SK-N-SH) 21341445
chr1 155193309 155194235 ZNF274 GTRD no Cervix (HeLa-S3) 21341447
chr1 155193383 155195502 TCF7L2 GTRD no Colon (HCT116) 21341450
chr1 155193416 155194265 ZBTB33 GTRD no Brain (SK-N-SH) 21341451
chr1 155193633 155195070 TCF7L2 GTRD no Colon (HCT116) 21341455
chr1 155193743 155194181 ZNF143 GTRD no Epithelial (MCF-7) 21341456
chr1 155193782 155194526 TCF7L2 GTRD no Colon (HCT116) 21341457
chr1 155194123 155194143 PPARG JASPAR yes 32336408
Genes associated with rs5777942[chr1:155194140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More