EnhancerDB
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  3. rs577820359[chr17:55481093]
Enhancers that have rs577820359[chr17:55481093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577820359[chr17:55481093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55481083 55481095 TFAP2A JASPAR yes 54951338
chr17 55481083 55481095 TFAP2B JASPAR yes 54951339
chr17 55481083 55481095 TFAP2C JASPAR yes 54951340
chr17 55481083 55481098 TFAP2A JASPAR yes 54951341
chr17 55481083 55481098 TFAP2C JASPAR yes 54951342
chr17 55481084 55481095 EBF1 JASPAR yes 54951343
chr17 55481090 55481094 LFA1 TRANSFAC yes 54951344
Genes associated with rs577820359[chr17:55481093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More