EnhancerDB
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  3. rs577860247[chr6:13463374]
Enhancers that have rs577860247[chr6:13463374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13451065 13468999 enh8964
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs577860247[chr6:13463374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13463354 13463375 REST JASPAR yes 100034855
chr6 13463367 13463374 NKX3-1 JASPAR yes 100034858
chr6 13463370 13463380 ALX3 JASPAR yes 100034859
chr6 13463370 13463380 EMX1 JASPAR yes 100034860
chr6 13463370 13463380 EMX2 JASPAR yes 100034861
chr6 13463370 13463380 ESX1 JASPAR yes 100034862
chr6 13463370 13463380 GSX1 JASPAR yes 100034863
chr6 13463370 13463380 GSX2 JASPAR yes 100034864
chr6 13463370 13463380 HESX1 JASPAR yes 100034865
chr6 13463370 13463380 LBX2 JASPAR yes 100034866
chr6 13463370 13463380 LHX2 JASPAR yes 100034867
chr6 13463370 13463380 LHX6 JASPAR yes 100034868
chr6 13463370 13463380 MIXL1 JASPAR yes 100034869
chr6 13463370 13463380 MNX1 JASPAR yes 100034870
chr6 13463370 13463380 NOTO JASPAR yes 100034871
chr6 13463370 13463380 POU6F1 JASPAR yes 100034872
chr6 13463370 13463380 RAX JASPAR yes 100034873
chr6 13463371 13463379 ISX JASPAR yes 100034874
chr6 13463371 13463379 LMX1A JASPAR yes 100034875
chr6 13463371 13463379 LMX1B JASPAR yes 100034876
chr6 13463371 13463379 NKX6-1 JASPAR yes 100034877
chr6 13463371 13463379 NKX6-2 JASPAR yes 100034878
chr6 13463371 13463379 PRRX1 JASPAR yes 100034879
chr6 13463371 13463379 RAX2 JASPAR yes 100034880
chr6 13463371 13463379 SHOX JASPAR yes 100034881
chr6 13463371 13463379 UNCX JASPAR yes 100034882
chr6 13463371 13463379 VAX1 JASPAR yes 100034883
chr6 13463371 13463381 POU6F2 JASPAR yes 100034884
Genes associated with rs577860247[chr6:13463374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More