EnhancerDB
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  3. rs5779000[chr1:178615665]
Enhancers that have rs5779000[chr1:178615665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs5779000[chr1:178615665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178615660 178615675 MEF2C JASPAR yes 33432758
chr1 178615660 178615681 IRF1 JASPAR yes 33432759
chr1 178615664 178615685 IRF1 JASPAR yes 33432760
chr1 178615665 178615680 FOXP1 JASPAR yes 33432761
Genes associated with rs5779000[chr1:178615665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More