EnhancerDB
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  3. rs577949946[chr17:29822826]
Enhancers that have rs577949946[chr17:29822826]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 29816091 29829595 enh4360
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs577949946[chr17:29822826]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 29822822 29822834 NHLH1 JASPAR yes 53842566
chr17 29822823 29822832 SNAI2 JASPAR yes 53842567
chr17 29822823 29822833 ID4 JASPAR yes 53842568
chr17 29822823 29822833 NHLH1 JASPAR yes 53842569
chr17 29822823 29822833 TCF3 JASPAR yes 53842570
chr17 29822823 29822833 TCF4 JASPAR yes 53842571
chr17 29822825 29822834 ZEB1 JASPAR yes 53842572
chr17 29822826 29822834 TBX5 JASPAR yes 53842573
Genes associated with rs577949946[chr17:29822826], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More