EnhancerDB
  1. Home
  2. SNP
  3. rs577993425[chr12:58289294]
Enhancers that have rs577993425[chr12:58289294]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58279727 58295915 enh2398
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs577993425[chr12:58289294]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58289281 58289302 ZNF263 JASPAR yes 121148355
chr12 58289288 58289299 E2F6 JASPAR yes 121148356
chr12 58289289 58289294 SP1 TRANSFAC yes 121148357
chr12 58289290 58289300 SP1 JASPAR yes 121148358
chr12 58289293 58289314 ZNF263 JASPAR yes 121148359
chr12 58289294 58289301 CEBPA TRANSFAC yes 121148360
chr12 58289294 58289558 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21551655
Genes associated with rs577993425[chr12:58289294], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More