EnhancerDB
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  3. rs5780102[chr1:202083017]
Enhancers that have rs5780102[chr1:202083017]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202068088 202086155 enh12535
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5780102[chr1:202083017]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202082984 202083480 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21367427
chr1 202083013 202083033 RREB1 JASPAR yes 34555390
chr1 202083015 202083035 RREB1 JASPAR yes 34555391
chr1 202083017 202083037 RREB1 JASPAR yes 34555392
Genes associated with rs5780102[chr1:202083017], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More