EnhancerDB
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  3. rs578016469[chr6:111874889]
Enhancers that have rs578016469[chr6:111874889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111869465 111876495 enh23513
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 111871688 111876668 vista1487
VISTA
Transcript factors that have rs578016469[chr6:111874889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111874886 111874901 FOXP1 JASPAR yes 22275110
chr6 111874886 111874901 FOXP1 JASPAR yes 104353573
chr6 111874887 111874902 FOXP1 JASPAR yes 22275111
chr6 111874887 111874902 FOXP1 JASPAR yes 104353574
chr6 111874888 111874903 FOXP1 JASPAR yes 22275112
chr6 111874888 111874903 FOXP1 JASPAR yes 104353575
chr6 111874888 111874909 IRF1 JASPAR yes 22275113
chr6 111874888 111874909 IRF1 JASPAR yes 104353576
chr6 111874889 111874904 FOXP1 JASPAR yes 22275114
chr6 111874889 111874904 FOXP1 JASPAR yes 104353577
chr6 111874889 111874910 IRF1 JASPAR yes 22275115
chr6 111874889 111874910 IRF1 JASPAR yes 104353578
Genes associated with rs578016469[chr6:111874889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More