EnhancerDB
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  3. rs5780210[chr1:204049457]
Enhancers that have rs5780210[chr1:204049457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5780210[chr1:204049457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204049175 204049691 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370074
chr1 204049175 204049691 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859539
chr1 204049185 204049855 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370075
chr1 204049185 204049855 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859540
chr1 204049211 204049871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370076
chr1 204049211 204049871 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859541
chr1 204049316 204049806 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370077
chr1 204049316 204049806 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859542
chr1 204049323 204049647 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370078
chr1 204049323 204049647 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859543
chr1 204049329 204049859 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370079
chr1 204049329 204049859 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859544
chr1 204049347 204049811 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21370080
chr1 204049347 204049811 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107859545
chr1 204049355 204049611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370081
chr1 204049355 204049611 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859546
chr1 204049362 204049772 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370082
chr1 204049362 204049772 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859547
chr1 204049368 204049752 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370083
chr1 204049368 204049752 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859548
chr1 204049378 204049894 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370084
chr1 204049378 204049894 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859549
chr1 204049423 204049799 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21370085
chr1 204049423 204049799 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107859550
chr1 204049425 204049755 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370086
chr1 204049425 204049755 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859551
chr1 204049429 204049825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370087
chr1 204049429 204049825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859552
chr1 204049430 204049834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370088
chr1 204049430 204049834 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859553
chr1 204049441 204049457 GLIS1 JASPAR yes 34676981
chr1 204049447 204049823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370089
chr1 204049447 204049823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859554
chr1 204049454 204049918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370090
chr1 204049454 204049918 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859555
Genes associated with rs5780210[chr1:204049457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More