EnhancerDB
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  3. rs578038543[chr1:45196174]
Enhancers that have rs578038543[chr1:45196174]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45192844 45199975 enh313
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs578038543[chr1:45196174]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45196159 45196174 FOXP1 JASPAR yes 28578166
chr1 45196159 45196180 IRF1 JASPAR yes 28578167
chr1 45196160 45196175 FOXP1 JASPAR yes 28578168
chr1 45196163 45196178 STAT2 JASPAR yes 28578169
Genes associated with rs578038543[chr1:45196174], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More