EnhancerDB
  1. Home
  2. SNP
  3. rs578049642[chr16:15589528]
Enhancers that have rs578049642[chr16:15589528]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 15573928 15593521 enh31710
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs578049642[chr16:15589528]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 15589516 15589530 RORA JASPAR yes 9730463
chr16 15589524 15589535 HOXA10 JASPAR yes 9730464
chr16 15589525 15589534 CDX1 JASPAR yes 9730465
chr16 15589525 15589536 CDX2 JASPAR yes 9730466
Genes associated with rs578049642[chr16:15589528], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More