EnhancerDB
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  3. rs5780667[chr1:212105371]
Enhancers that have rs5780667[chr1:212105371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs5780667[chr1:212105371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212105180 212106902 ZNF274 GTRD no Bone Marrow (K562) 21377716
chr1 212105356 212105377 IRF1 JASPAR yes 35093188
chr1 212105358 212105373 STAT2 JASPAR yes 35093189
chr1 212105359 212105373 STAT1 JASPAR yes 35093190
chr1 212105360 212105372 IRF1 JASPAR yes 35093191
chr1 212105360 212105374 IRF7 JASPAR yes 35093192
chr1 212105360 212105375 IRF9 JASPAR yes 35093193
chr1 212105361 212105382 IRF1 JASPAR yes 35093194
chr1 212105362 212105377 FOXP1 JASPAR yes 35093196
chr1 212105363 212105374 FOXP2 JASPAR yes 35093197
chr1 212105363 212105375 FOXC2 JASPAR yes 35093198
chr1 212105363 212105378 STAT2 JASPAR yes 35093199
chr1 212105364 212105379 FOXP1 JASPAR yes 35093200
chr1 212105366 212105381 FOXP1 JASPAR yes 35093201
chr1 212105367 212105382 FOXP1 JASPAR yes 35093202
chr1 212105368 212105383 FOXP1 JASPAR yes 35093203
chr1 212105370 212105385 MEF2C JASPAR yes 35093204
Genes associated with rs5780667[chr1:212105371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More