EnhancerDB
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  3. rs578084888[chr5:172176973]
Enhancers that have rs578084888[chr5:172176973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs578084888[chr5:172176973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172176968 172176989 IRF1 JASPAR yes 67822066
chr5 172176972 172176990 IRF2 JASPAR yes 67822067
Genes associated with rs578084888[chr5:172176973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More