EnhancerDB
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  3. rs578114431[chr16:85599030]
Enhancers that have rs578114431[chr16:85599030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs578114431[chr16:85599030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85598062 85599177 ZNF143 GTRD no Epithelial (MCF-7) 21729320
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 21729339
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216159
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216160
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216161
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216162
chr16 85598416 85604745 ZNF274 GTRD no Bone Marrow (K562) 108216163
chr16 85599012 85599033 IRF1 JASPAR yes 12077274
chr16 85599013 85599033 RREB1 JASPAR yes 12077276
chr16 85599018 85599038 RREB1 JASPAR yes 12077278
chr16 85599019 85599039 RREB1 JASPAR yes 12077279
chr16 85599022 85599042 RREB1 JASPAR yes 12077280
chr16 85599025 85599037 ZBTB7C JASPAR yes 12077281
chr16 85599025 85599040 RUNX2 JASPAR yes 12077282
chr16 85599025 85599045 RREB1 JASPAR yes 12077283
chr16 85599026 85599036 RUNX3 JASPAR yes 12077284
chr16 85599026 85599046 RREB1 JASPAR yes 12077285
chr16 85599029 85599049 RREB1 JASPAR yes 12077286
chr16 85599030 85599050 RREB1 JASPAR yes 12077287
Genes associated with rs578114431[chr16:85599030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More