EnhancerDB
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  3. rs578131547[chr12:52543073]
Enhancers that have rs578131547[chr12:52543073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs578131547[chr12:52543073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52542153 52543073 ZBTB33 GTRD no Lung (A549) 108033238
chr12 52542569 52543089 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033277
chr12 52542705 52543365 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546456
chr12 52542705 52543365 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033280
chr12 52542851 52543320 ZNF274 GTRD no Liver (HepG2) 21546457
chr12 52542938 52543387 ZNF274 GTRD no Liver (HepG2) 21546458
chr12 52543072 52543079 JUN TRANSFAC yes 120922169
Genes associated with rs578131547[chr12:52543073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More