EnhancerDB
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  3. rs5781642[chr1:231526599]
Enhancers that have rs5781642[chr1:231526599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 231515558 231535204 enh984
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5781642[chr1:231526599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 231526588 231526600 MEF2A JASPAR yes 36088192
chr1 231526588 231526600 MEF2B JASPAR yes 36088193
chr1 231526588 231526600 MEF2D JASPAR yes 36088194
chr1 231526589 231526599 MEF2A JASPAR yes 36088195
chr1 231526591 231526605 ONECUT1 JASPAR yes 36088196
chr1 231526591 231526605 ONECUT2 JASPAR yes 36088197
chr1 231526591 231526605 ONECUT3 JASPAR yes 36088198
chr1 231526593 231526614 IRF1 JASPAR yes 36088199
chr1 231526598 231526613 FOXP1 JASPAR yes 36088200
chr1 231526599 231526614 FOXP1 JASPAR yes 36088201
Genes associated with rs5781642[chr1:231526599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More