EnhancerDB
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  3. rs578169394[chr2:26280312]
Enhancers that have rs578169394[chr2:26280312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs578169394[chr2:26280312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26280300 26280315 FOXP1 JASPAR yes 72519867
chr2 26280301 26280316 FOXP1 JASPAR yes 72519869
chr2 26280301 26280322 IRF1 JASPAR yes 72519870
chr2 26280302 26280317 FOXP1 JASPAR yes 72519871
chr2 26280302 26280323 IRF1 JASPAR yes 72519872
chr2 26280303 26280318 FOXP1 JASPAR yes 72519873
chr2 26280308 26280329 IRF1 JASPAR yes 72519874
Genes associated with rs578169394[chr2:26280312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More