EnhancerDB
  1. Home
  2. SNP
  3. rs578188249[chr2:28910228]
Enhancers that have rs578188249[chr2:28910228]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28895045 28921335 enh18395
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs578188249[chr2:28910228]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28910222 28910232 NKX2-3 JASPAR yes 72669002
chr2 28910223 28910231 ISL2 JASPAR yes 72669003
chr2 28910223 28910232 NKX3-2 JASPAR yes 72669004
Genes associated with rs578188249[chr2:28910228], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More