EnhancerDB
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  3. rs579302[chr1:55042013]
Enhancers that have rs579302[chr1:55042013]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs579302[chr1:55042013]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55042005 55042024 RFX2 JASPAR yes 28994595
chr1 55042007 55042022 RFX5 JASPAR yes 28994596
chr1 55042010 55042019 NFIX JASPAR yes 28994597
chr1 55042011 55042017 NFIC JASPAR yes 28994598
Genes associated with rs579302[chr1:55042013], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More