EnhancerDB
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  3. rs579971[chr6:13403181]
Enhancers that have rs579971[chr6:13403181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs579971[chr6:13403181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13403178 13403193 FOXP1 JASPAR yes 100026170
chr6 13403179 13403190 FOXA1 JASPAR yes 100026171
chr6 13403179 13403190 FOXH1 JASPAR yes 100026172
chr6 13403179 13403194 FOXA1 JASPAR yes 100026173
chr6 13403180 13403191 FOXC1 JASPAR yes 100026174
chr6 13403180 13403192 FOXC2 JASPAR yes 100026175
chr6 13403181 13403192 FOXP2 JASPAR yes 100026176
Genes associated with rs579971[chr6:13403181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More