EnhancerDB
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  3. rs5801554[chr12:124985591]
Enhancers that have rs5801554[chr12:124985591]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124961018 125019902 enh2673
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5801554[chr12:124985591]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124985086 124985616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580913
chr12 124985086 124985616 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108068790
chr12 124985185 124985781 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108068794
chr12 124985259 124985635 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21580918
chr12 124985259 124985635 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108068796
chr12 124985589 124985600 NRF1 JASPAR yes 124385462
chr12 124985591 124985602 NRF1 JASPAR yes 124385463
Genes associated with rs5801554[chr12:124985591], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More