EnhancerDB
  1. Home
  2. SNP
  3. rs58060948[chr1:25040360]
Enhancers that have rs58060948[chr1:25040360]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58060948[chr1:25040360]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25040350 25040371 IRF1 JASPAR yes 27521944
chr1 25040353 25040367 SPI1 JASPAR yes 27521945
chr1 25040353 25040367 SPIC JASPAR yes 27521946
chr1 25040354 25040362 EHF JASPAR yes 27521947
chr1 25040354 25040375 IRF1 JASPAR yes 27521948
chr1 25040356 25040361 ETS2 TRANSFAC yes 27521949
chr1 25040358 25040373 FOXP1 JASPAR yes 27521950
chr1 25040359 25040374 FOXP1 JASPAR yes 27521951
chr1 25040359 25040380 IRF1 JASPAR yes 27521952
chr1 25040360 25040375 FOXP1 JASPAR yes 27521953
Genes associated with rs58060948[chr1:25040360], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More