EnhancerDB
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  3. rs58179865[chr1:25061646]
Enhancers that have rs58179865[chr1:25061646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58179865[chr1:25061646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25061640 25061650 ID4 JASPAR yes 27525160
chr1 25061641 25061650 SNAI2 JASPAR yes 27525161
chr1 25061642 25061647 USF2 TRANSFAC yes 27525162
Genes associated with rs58179865[chr1:25061646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More