EnhancerDB
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  3. rs5821273[chr17:57706879]
Enhancers that have rs5821273[chr17:57706879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57699645 57721455 enh4504
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs5821273[chr17:57706879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57706873 57706894 IRF1 JASPAR yes 55072253
chr17 57706874 57706895 IRF1 JASPAR yes 55072254
chr17 57706876 57706897 IRF1 JASPAR yes 55072255
chr17 57706877 57706898 IRF1 JASPAR yes 55072256
chr17 57706878 57706893 FOXP1 JASPAR yes 55072257
chr17 57706878 57706899 IRF1 JASPAR yes 55072258
chr17 57706879 57706894 FOXP1 JASPAR yes 55072259
chr17 57706879 57706900 IRF1 JASPAR yes 55072260
Genes associated with rs5821273[chr17:57706879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More