EnhancerDB
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  3. rs5821349[chr17:60167348]
Enhancers that have rs5821349[chr17:60167348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 60161225 60181195 enh32257
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs5821349[chr17:60167348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 60166266 60167988 TCF7L2 GTRD no Colon (HCT116) 21777670
chr17 60167345 60167360 FOXP1 JASPAR yes 55180553
chr17 60167346 60167361 FOXP1 JASPAR yes 55180554
chr17 60167347 60167362 FOXP1 JASPAR yes 55180555
chr17 60167347 60167368 IRF1 JASPAR yes 55180556
chr17 60167348 60167363 FOXP1 JASPAR yes 55180557
chr17 60167348 60167369 IRF1 JASPAR yes 55180558
Genes associated with rs5821349[chr17:60167348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More