EnhancerDB
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  3. rs5822135[chr17:74439676]
Enhancers that have rs5822135[chr17:74439676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 74401123 74447132 enh4607
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs5822135[chr17:74439676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 74439644 74441163 TCF7L2 GTRD no Colon (HCT116) 21788341
chr17 74439644 74441163 TCF7L2 GTRD no Colon (HCT116) 108295656
chr17 74439668 74439686 NR3C1 JASPAR yes 56001193
chr17 74439674 74439678 YY1 TRANSFAC yes 56001194
chr17 74439674 74439689 FOXP1 JASPAR yes 56001195
chr17 74439675 74439690 FOXP1 JASPAR yes 56001196
chr17 74439676 74439691 FOXP1 JASPAR yes 56001197
Genes associated with rs5822135[chr17:74439676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More