EnhancerDB
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  3. rs58233168[chr17:38663990]
Enhancers that have rs58233168[chr17:38663990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58233168[chr17:38663990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38662690 38664000 ZNF274 GTRD no Cervix (HeLa-S3) 21754053
chr17 38662721 38664016 ZNF143 GTRD no Epithelial (MCF-7) 21754054
chr17 38662927 38664139 ZNF274 GTRD no Bone Marrow (K562) 21754074
chr17 38662992 38664070 ZNF274 GTRD no Blood (GM12878) 21754091
chr17 38663133 38664380 TCF7L2 GTRD no Colon (HCT116) 21754163
chr17 38663829 38664201 ZNF143 GTRD no Epithelial (MCF-7) 21754185
chr17 38663970 38664513 TCF7L2 GTRD no Colon (HCT116) 21754186
chr17 38663990 38663994 TEAD2 TRANSFAC yes 54218856
Genes associated with rs58233168[chr17:38663990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More