EnhancerDB
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  3. rs58287933[chr17:57447164]
Enhancers that have rs58287933[chr17:57447164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs58287933[chr17:57447164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57442286 57448063 ZNF143 GTRD no Epithelial (MCF-7) 21774780
chr17 57442286 57448063 ZNF143 GTRD no Epithelial (MCF-7) 108275817
chr17 57442286 57448063 ZNF143 GTRD no Epithelial (MCF-7) 108275818
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 21774797
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275852
chr17 57443070 57450073 ZNF143 GTRD no Epithelial (MCF-7) 108275853
chr17 57447147 57447167 PPARG JASPAR yes 55053453
chr17 57447157 57447168 ESRRA JASPAR yes 55053454
chr17 57447158 57447166 NR4A2 JASPAR yes 55053455
chr17 57447159 57447169 RORA JASPAR yes 55053456
Genes associated with rs58287933[chr17:57447164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More